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aiida-gulp
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A
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B
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C
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D
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E
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F
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G
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_
__getnewargs__() (aiida_gulp.potentials.base.PotentialContent method)
__new__() (aiida_gulp.potentials.base.PotentialContent static method)
__repr__() (aiida_gulp.potentials.base.PotentialContent method)
A
add_path() (aiida_gulp.data.symmetry.SymmetryData method)
affine_to_operation() (in module aiida_gulp.symmetry.symmetry)
aiida_gulp (module)
aiida_gulp.calculations (module)
aiida_gulp.calculations.gulp_abstract (module)
aiida_gulp.calculations.gulp_fitting (module)
aiida_gulp.calculations.gulp_optimize (module)
aiida_gulp.calculations.gulp_single (module)
aiida_gulp.cmndline (module)
aiida_gulp.common (module)
aiida_gulp.common.atoms (module)
aiida_gulp.common.dict_funcs (module)
aiida_gulp.common.kpoints (module)
aiida_gulp.common.mapping (module)
aiida_gulp.common.parsing (module)
aiida_gulp.data (module)
aiida_gulp.data.potential (module)
aiida_gulp.data.symmetry (module)
aiida_gulp.parsers (module)
aiida_gulp.parsers.parse_fitting (module)
aiida_gulp.parsers.parse_opt (module)
aiida_gulp.parsers.parse_single (module)
aiida_gulp.parsers.raw (module)
aiida_gulp.parsers.raw.parse_output_common (module)
aiida_gulp.parsers.raw.parse_output_fit (module)
aiida_gulp.parsers.raw.parse_output_std (module)
aiida_gulp.parsers.raw.write_geometry (module)
aiida_gulp.parsers.raw.write_input (module)
aiida_gulp.parsers.raw.write_input_fitting (module)
aiida_gulp.potentials (module)
aiida_gulp.potentials.base (module)
aiida_gulp.potentials.common (module)
aiida_gulp.potentials.lj (module)
aiida_gulp.potentials.raw_reaxff (module)
aiida_gulp.potentials.reaxff (module)
aiida_gulp.symmetry (module)
aiida_gulp.symmetry.symmetry (module)
aiida_gulp.tests (module)
aiida_gulp.tests.mock_gulp (module)
aiida_gulp.tests.resources (module)
aiida_gulp.tests.utils (module)
aiida_gulp.unit_styles (module)
aiida_gulp.validation (module)
aiida_gulp.validation.schemas (module)
aiida_gulp.validation.utils (module)
AiidaTestApp (class in aiida_gulp.tests.utils)
assess_species() (in module aiida_gulp.parsers.raw.parse_output_fit)
assign_exit_code() (in module aiida_gulp.parsers.raw.parse_output_fit)
(in module aiida_gulp.parsers.raw.parse_output_std)
B
BuilderEncoder (class in aiida_gulp.common.dict_funcs)
C
cartesian_to_frac() (in module aiida_gulp.symmetry.symmetry)
check_calculation() (aiida_gulp.tests.utils.AiidaTestApp static method)
compare_operations() (aiida_gulp.data.symmetry.SymmetryData method)
compute_symmetry_dataset() (in module aiida_gulp.symmetry.symmetry)
compute_symmetry_dict() (in module aiida_gulp.symmetry.symmetry)
content() (aiida_gulp.potentials.base.PotentialContent property)
convert_structure() (in module aiida_gulp.symmetry.symmetry)
convert_units() (in module aiida_gulp.common.parsing)
create_1d_geometry() (in module aiida_gulp.parsers.raw.write_geometry)
create_content() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
(aiida_gulp.potentials.base.PotentialWriterAbstract method)
create_geometry_lines() (in module aiida_gulp.parsers.raw.write_geometry)
create_gulp_fields() (in module aiida_gulp.potentials.raw_reaxff)
create_input() (aiida_gulp.calculations.gulp_abstract.GulpAbstractCalculation method)
(aiida_gulp.calculations.gulp_optimize.GulpOptCalculation method)
(aiida_gulp.calculations.gulp_single.GulpSingleCalculation method)
create_input_lines() (in module aiida_gulp.parsers.raw.write_input_fitting)
create_kpoints_from_distance() (in module aiida_gulp.common.kpoints)
create_observable_map() (aiida_gulp.calculations.gulp_fitting.GulpFittingCalculation method)
create_structure() (aiida_gulp.parsers.parse_opt.GulpOptParser method)
D
data() (aiida_gulp.data.symmetry.SymmetryData property)
data_schema (aiida_gulp.data.symmetry.SymmetryData attribute)
default() (aiida_gulp.common.dict_funcs.BuilderEncoder method)
define() (aiida_gulp.calculations.gulp_abstract.GulpAbstractCalculation class method)
(aiida_gulp.calculations.gulp_fitting.GulpFittingCalculation class method)
(aiida_gulp.calculations.gulp_optimize.GulpOptCalculation class method)
(aiida_gulp.calculations.gulp_single.GulpSingleCalculation class method)
display_json() (in module aiida_gulp.common.dict_funcs)
E
EmpiricalPotential (class in aiida_gulp.data.potential)
entry_name (aiida_gulp.data.potential.EmpiricalPotential attribute)
environment() (aiida_gulp.tests.utils.AiidaTestApp property)
extract_from_dump() (aiida_gulp.parsers.parse_fitting.GulpFittingParser method)
F
filter_by_species() (in module aiida_gulp.potentials.common)
find_primitive() (in module aiida_gulp.symmetry.symmetry)
format_gulp_value() (in module aiida_gulp.potentials.raw_reaxff)
format_lammps_value() (in module aiida_gulp.potentials.raw_reaxff)
frac_to_cartesian() (in module aiida_gulp.symmetry.symmetry)
G
generate_calcinfo() (aiida_gulp.tests.utils.AiidaTestApp static method)
generate_calcjob_node() (aiida_gulp.tests.utils.AiidaTestApp method)
generate_context() (aiida_gulp.tests.utils.AiidaTestApp static method)
get_calc_cls() (aiida_gulp.tests.utils.AiidaTestApp static method)
get_content() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
get_content_hash() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
get_content_lines() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
get_crystal_system_name() (in module aiida_gulp.symmetry.symmetry)
get_crystal_type_name() (in module aiida_gulp.symmetry.symmetry)
get_data_node() (aiida_gulp.tests.utils.AiidaTestApp static method)
get_default_metadata() (aiida_gulp.tests.utils.AiidaTestApp static method)
(in module aiida_gulp.tests.utils)
get_description() (aiida_gulp.data.potential.EmpiricalPotential method)
(aiida_gulp.data.symmetry.SymmetryData method)
(aiida_gulp.potentials.base.PotentialWriterAbstract class method)
(aiida_gulp.potentials.lj.PotentialWriterLJ class method)
(aiida_gulp.potentials.reaxff.PotentialWriterReaxff class method)
get_dict() (aiida_gulp.data.symmetry.SymmetryData method)
get_fitting_dict() (aiida_gulp.data.potential.EmpiricalPotential method)
get_fitting_schema() (aiida_gulp.potentials.base.PotentialWriterAbstract class method)
get_geometry_lines() (aiida_gulp.parsers.raw.write_input.InputCreationBase static method)
get_hall_number_from_symmetry() (in module aiida_gulp.symmetry.symmetry)
get_input_keywords() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
(aiida_gulp.parsers.raw.write_input.InputCreationOpt method)
get_input_lines() (aiida_gulp.data.potential.EmpiricalPotential method)
get_keys() (in module aiida_gulp.common.dict_funcs)
get_lattice_type_name() (in module aiida_gulp.symmetry.symmetry)
get_logging_container() (in module aiida_gulp.common.mapping)
get_or_create_code() (aiida_gulp.tests.utils.AiidaTestApp method)
(in module aiida_gulp.tests.utils)
get_or_create_computer() (aiida_gulp.tests.utils.AiidaTestApp method)
get_or_create_local_computer() (in module aiida_gulp.tests.utils)
get_other_option_lines() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
(aiida_gulp.parsers.raw.write_input.InputCreationOpt method)
get_path_to_executable() (in module aiida_gulp.tests.utils)
get_potential_dict() (aiida_gulp.data.potential.EmpiricalPotential method)
get_pressure() (in module aiida_gulp.unit_styles)
get_retrieve_list() (aiida_gulp.calculations.gulp_abstract.GulpAbstractCalculation method)
(aiida_gulp.calculations.gulp_optimize.GulpOptCalculation method)
get_schema() (aiida_gulp.potentials.base.PotentialWriterAbstract class method)
(aiida_gulp.potentials.reaxff.PotentialWriterReaxff class method)
get_style_map() (in module aiida_gulp.unit_styles)
get_test_structure() (in module aiida_gulp.tests.resources)
get_units_dict() (in module aiida_gulp.unit_styles)
GulpAbstractCalculation (class in aiida_gulp.calculations.gulp_abstract)
GulpFittingCalculation (class in aiida_gulp.calculations.gulp_fitting)
GulpFittingParser (class in aiida_gulp.parsers.parse_fitting)
GulpOptCalculation (class in aiida_gulp.calculations.gulp_optimize)
GulpOptParser (class in aiida_gulp.parsers.parse_opt)
GulpSingleCalculation (class in aiida_gulp.calculations.gulp_single)
GulpSingleParser (class in aiida_gulp.parsers.parse_single)
H
hall_number() (aiida_gulp.data.symmetry.SymmetryData property)
has_fitting_flags() (aiida_gulp.data.potential.EmpiricalPotential property)
I
input_lines_md5() (aiida_gulp.data.potential.EmpiricalPotential property)
InputCreationBase (class in aiida_gulp.parsers.raw.write_input)
InputCreationOpt (class in aiida_gulp.parsers.raw.write_input)
InputCreationSingle (class in aiida_gulp.parsers.raw.write_input)
L
link_output_results (aiida_gulp.calculations.gulp_abstract.GulpAbstractCalculation attribute)
link_output_structure (aiida_gulp.calculations.gulp_abstract.GulpAbstractCalculation attribute)
list_pair_styles() (aiida_gulp.data.potential.EmpiricalPotential class method)
load_pair_style() (aiida_gulp.data.potential.EmpiricalPotential class method)
load_schema() (in module aiida_gulp.validation.utils)
load_validator() (in module aiida_gulp.validation.utils)
M
main() (in module aiida_gulp.tests.mock_gulp)
map_nested_dicts() (in module aiida_gulp.common.dict_funcs)
N
num_symops() (aiida_gulp.data.symmetry.SymmetryData property)
number_flagged() (aiida_gulp.potentials.base.PotentialContent property)
number_of_flags() (aiida_gulp.potentials.base.PotentialContent property)
number_of_variables() (aiida_gulp.data.potential.EmpiricalPotential property)
O
open_resource_binary() (in module aiida_gulp.tests.resources)
open_resource_text() (in module aiida_gulp.tests.resources)
operation_cart_to_frac() (in module aiida_gulp.symmetry.symmetry)
operation_frac_to_cart() (in module aiida_gulp.symmetry.symmetry)
operation_to_affine() (in module aiida_gulp.symmetry.symmetry)
operations_cart_to_frac() (in module aiida_gulp.symmetry.symmetry)
operations_frac_to_cart() (in module aiida_gulp.symmetry.symmetry)
P
pair_style() (aiida_gulp.data.potential.EmpiricalPotential property)
parse() (aiida_gulp.parsers.parse_fitting.GulpFittingParser method)
(aiida_gulp.parsers.parse_opt.GulpOptParser method)
(aiida_gulp.parsers.parse_single.GulpSingleParser method)
parse_file() (in module aiida_gulp.parsers.raw.parse_output_fit)
(in module aiida_gulp.parsers.raw.parse_output_std)
parse_from_node() (aiida_gulp.tests.utils.AiidaTestApp static method)
(in module aiida_gulp.tests.utils)
potential_validator() (in module aiida_gulp.calculations.gulp_abstract)
PotentialContent (class in aiida_gulp.potentials.base)
PotentialWriterAbstract (class in aiida_gulp.potentials.base)
PotentialWriterLJ (class in aiida_gulp.potentials.lj)
PotentialWriterReaxff (class in aiida_gulp.potentials.reaxff)
prepare_for_spglib() (in module aiida_gulp.symmetry.symmetry)
prepare_for_submission() (aiida_gulp.calculations.gulp_abstract.GulpAbstractCalculation method)
(aiida_gulp.calculations.gulp_fitting.GulpFittingCalculation method)
prepare_process_inputs() (in module aiida_gulp.common.mapping)
print_structure() (in module aiida_gulp.symmetry.symmetry)
R
read_atom_section() (aiida_gulp.potentials.base.PotentialWriterAbstract static method)
read_energy_components() (in module aiida_gulp.parsers.raw.parse_output_common)
read_exising() (aiida_gulp.potentials.base.PotentialWriterAbstract method)
(aiida_gulp.potentials.lj.PotentialWriterLJ method)
read_gulp_table() (in module aiida_gulp.parsers.raw.parse_output_common)
read_lammps_format() (in module aiida_gulp.potentials.raw_reaxff)
read_reaxff_econtribs() (in module aiida_gulp.parsers.raw.parse_output_common)
read_resource_binary() (in module aiida_gulp.tests.resources)
read_resource_text() (in module aiida_gulp.tests.resources)
recursive_round() (in module aiida_gulp.common.dict_funcs)
reset_kind_names() (in module aiida_gulp.symmetry.symmetry)
resource_context() (in module aiida_gulp.tests.resources)
S
sandbox_folder() (aiida_gulp.tests.utils.AiidaTestApp method)
sanitize_calc_info() (in module aiida_gulp.tests.utils)
set_data() (aiida_gulp.data.potential.EmpiricalPotential method)
(aiida_gulp.data.symmetry.SymmetryData method)
settings_schema (aiida_gulp.calculations.gulp_fitting.GulpFittingCalculation attribute)
spacegroup_info() (aiida_gulp.data.symmetry.SymmetryData property)
species() (aiida_gulp.data.potential.EmpiricalPotential property)
split_numbers() (in module aiida_gulp.common.parsing)
standardize_cell() (in module aiida_gulp.symmetry.symmetry)
structure_info() (in module aiida_gulp.symmetry.symmetry)
structure_to_dict() (in module aiida_gulp.symmetry.symmetry)
SymmetryData (class in aiida_gulp.data.symmetry)
U
update_mapping() (in module aiida_gulp.common.mapping)
V
validate_1d_geometry() (in module aiida_gulp.parsers.raw.write_geometry)
validate_against_schema() (in module aiida_gulp.validation.utils)
validate_parameters() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
(aiida_gulp.parsers.raw.write_input.InputCreationOpt method)
validate_potential() (aiida_gulp.calculations.gulp_fitting.GulpFittingCalculation class method)
validate_settings() (aiida_gulp.calculations.gulp_fitting.GulpFittingCalculation class method)
W
work_directory() (aiida_gulp.tests.utils.AiidaTestApp property)
wrap_bare_dict_inputs() (in module aiida_gulp.common.mapping)
write_content() (aiida_gulp.parsers.raw.write_input.InputCreationBase method)
write_gulp_format() (in module aiida_gulp.potentials.raw_reaxff)
write_lammps_format() (in module aiida_gulp.potentials.raw_reaxff)
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